CDS
| Accession Number | TCMCG006C17703 |
| gbkey | CDS |
| Protein Id | XP_022558937.1 |
| Location | complement(join(19309362..19309427,19309520..19309636,19309723..19309842,19309917..19310474,19310589..19310648,19310740..19310805,19310913..19311023,19311110..19311200,19311293..19311393,19311466..19311573,19311662..19312224,19312309..19312553,19312555..19314155)) |
| Gene | LOC106397661 |
| GeneID | 106397661 |
| Organism | Brassica napus |
Protein
| Length | 1269aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022703216.1 |
| Definition | LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Contains the following InterPro domains Small GTP-binding protein (InterPro IPR005225), Translation elongation factor EFTu EF1A, domain 2 (InterPro IPR004161), Translation initiation factor 2 related (InterPro IPR015760), Protein synthesis factor, GTP-binding (InterPro IPR000795) |
| KEGG_TC | - |
| KEGG_Module |
M00161
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko00194 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03012 [VIEW IN KEGG] |
| KEGG_ko |
ko:K02703
[VIEW IN KEGG] ko:K03243 [VIEW IN KEGG] |
| EC |
1.10.3.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00195
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko03013 [VIEW IN KEGG] map00195 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map03013 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGCGGAAGAAGCCGAGTGCTCGTGGTGGAGACGATGAACCCACTGCTTCATCTCTCGTTGGTGGTGCTAAATCCAAGAAGAAGTCCGTACAAATCGACGACGATGAGTACTCCGTAGGAACCGAGCTCTCTGAGGATCCGCCTAAAGGTGAGGAAGACAAGGTTGTTATCACTGGGAAGAAGAAGAGTAAGAAAGGGAATAAGAAAGGTGCGCTTCAGGATGACGAGGAAGACGATGTTGTTCCGGAGATTGCTTTTGAAGGGAAGAAGAAGAAGTCTAAGTCTAAGAAAGGTGGTGGCTCTGTTAGCTTTGCTTTGCTAGATGATGATGAAGGTGATAAGGATGATGAAGATGATAAAGTGGAGGATGAGCCTGTCATGAGTAACAAGGGTAAGAAAGGTGGTAATTCGTTTGCGGCTTCAGCTTTCGATGCACTTGGTGGTGATGATGAAGATGACGAGGAAGCGGAAAAAGATGAGGAGGAGGTGTCTCCCATCACCTTCTCTGGTAAGAAGAAGTCTTCTAAATCGTCCAAGAAGAGTGCTAATTCATTTGCGGCTGCTTTACTTGATGATGATGATGATGAAGAGGAGACTAATGCCGTTGAGGAGGAAGAGAGTCCTGAGATCATGTTTACTGGTAAGAAGAAGTCGTCTAAGAAGAAGGGCAGTAGTGTTTTGGCCTCGTTAGGTGATGATGACTCGATGCTAGGAAGTGAAGTTGCTGAGGAAATAAGTAAGGATAAAGCTTCGGATACTAAGAGTGCAGAGGTTGTAGAACCTGCGAAGAGTAAGAAAAAGAAGAAGAATAATAAGAGTGGAAGGACAGTACAGGAAGAAGATGATTTGGACAAACTTCTTGCAGAACTTGGAGAAGGCCCAGCTTCTGGAAAACCTGCTTCATCCCAGCCCGAAGAAGATAAAGTTCAAGCTCAGGCTCAGCCAGTTGCACCTGTAGAGAATGCTGGTGAGAAGGAAGAAGAAGAAGAGAGTGCTGCAGCGAAGAAAAGGAGAAAGAAGAAGGAGAAAGAGAAGGAAAAGAAAGCAGCAGCTGCAACCTCGTCTGTGGAGGCTAAGGAGGACAAACAAGAAGAATCAGTAGCTGAGCCACTGCGGGAGAAGAAGGATGCAAAGGGTAAAGCAGCTGAGAAGAAACTTCCTAAACATGTTAGAGAGATGCAAGAGGCTCTTGCACGAAGGCAAGAAGCTGAAGAGAGAAAGAAGAAGGAAGAGGAAGAGAAATTGAGAAAGGAGGAAGAGGAGCGTCTTAGGCAGGAAGAGCTTGAGAGGCAAGCTGAGGAGGCTAAGCGCAAGAAGAAGGAAAAGGAAAAGGAGAAACTTTTGAGGAAGAAGCTAGAGGGCAAGCTTCTAACAGCAAAGCAAAAGAGTGAAGCTCTTAAGAGGGAGGCTTTTAAGAACCAGTTGCTTGCTAATGGTGGAGGTCTCCCACTTGCAGATGAGGGCGAGCCTGCCACAAAGCGTCCCGTTTATGCCAACAAGAAAAAGTCAGCTCGCCAAAAGGGCAATGACTCTACCTCTGTTCAGGTGGAAGAGGAGGTAGACCCAAAAGAGAATCATGCAGATGAGCCAGATACTTTTTCAGCAGAAACTGAAAAGGTTGATTTAGTAGAGTCAGCAGACACTGATGAAAAATCAGGTACTGCTGATGTAGCTGCAGAGAATGGGGCTGAGGAAGATGAGGAAGAAGATGAATGGGATGCAAAAAGCTGGGGGGATGATGTTGATCTTAAGTTCAAAGGTGATTTCGATGATGAAGAGGACAAAGCTCAGCCTGTAGTGAAGAAAGATATGAATGACGCTGTCTCAAAGACGCAAGATTCAGGCCCTGAAACGGTAAAACCAACTGCTAAACCAGCAGGTACGGAAAACCCAACAGCACCTGCCACTAAAACTTTACCTGGAGTGGAAGATGCTGCACGTGGAAAACGTGCTACCCGGGCAAAAGATGCCTCTAAGAAAGGCAAAGGCTTAGCTTCCAGTGAACCCAAAGAGGGTGAAGAAAATCTCCGCTCTCCCATTTGCTGCATCATGGGCCATGTCGATACTGGTAAAACAAAGCTGTTGGATTGCATCAGAGGAACAAATGTACAGGAAGGCGAGGCTGGAGGTATAACTCAGCAGATTGGCGCAACATATTTCCCTGCGGAAAACATCCGAGAGAGAACCAGGGAACTGAAAGCCGATGCAAAACTTAAGGTGCCAGGTCTATTGGTTATTGATACACCTGGTCACGAGTCCTTCACGAATCTGCGGTCAAGGGGTTCAAGTTTGTGCGACCTTGCAATTTTGGTGGTTGACATAATGCATGGGTTGGAGCCACAAACCATAGAATCTCTAAATCTATTGAGAATGAGGGACACAGAGTTCATTGTTGCTTTGAATAAGGTGGATAGGCTATATGGATGGAAAACATGCAAGAATGCTCCTATCGTAAAGGCAATGAAGCAGCAAACTAAAGATGTTGTAAATGAATTTAACATGAGGCTCACTGGGATTATAACTCAGTTCAAGGAGCAAGGTCTCAACACTGAGCTTTACTACAAGAATAAAGAAATGGGAGAAACTTTCAGTATTGTTCCTACCAGTGCTATTACTGGGGAAGGGATCCCAGATCTTTTGCTGTTGTTGGTTAATTGGGCTCAGAAAACAATGGTTGAGAAGCTTACATATGTTGATGACGTGCAGTGTACTGTCCTGGAGGTCAAAGTTATAGAAGGCCATGGAACAACGATTGATGTTGTGTTGGTAAACGGTGTACTTCACGAAGGTGATCAAATCGTCGTGTGTGGGTTACAGGGACCTATAGTCACAACGATTAGAGCGTTACTGACTCCTCATCCAATGAAGGAGCTACGGGTGAAGGGTACTTATGTGCATCATAAAGAAATAAAGGCTGCACAGGGTATAAAAATTACAGCGCAGGGTCTTGAACACGCTATTGCTGGCACTGCTCTGCACGTGATTGGACCTGATGATGACATCGAAGCAATCAAGGAGCAGGCAATGGAAGACATGGAGTCAGTTCTGAGCAGGATTGACAAAAGCGGCGAAGGAGTTTATGTACAAGCGTCTACACTAGGGTCACTTGAAGCGTTGCTTGAATTCTTGAAGTCCCCAGCTGTGAAGATACCTGTAAGTGGCATCGGTATAGGGCCTGTGCATAAGAAGGATATCATGAAGGCGGGAGTGATGCTCGAGAGGAAGAAGGAATACGCTACGATTTTGGCTTTTGACGTGAAAGTGACAACAGACGCTCGTGAGCTCGCAGACGAAATGGGAGTTAAGATCTTCTGCGCTGATATCATCTACCATTTGTTCGATCAGTTTAAGGCGTATATTGAGAGTATCAAAGAGGAGAAGAAGAAGGAATCAGCCGATGAAGCAGTCTTCCCATGTGTCCTTCGGATTTTACCTAACTGTGTGTTCAATAAGAGAGACCCAATAGTCCTTGGAGTTGATGTCGTTGAGGGTATACTTAAGATTGGAACTCCTATCTGCGTCCCTAGTAGAGAGTTTATCGATATTGGCCGCATTGCCTCTATTGAGAACAATCACAAGCCCGTTGACTATGCGAAGAAGGGCAGCCAGGTGGCTATCAAGATTATTGCTTCAAACCCTGAAGAGCAGAAGATGTTTGGGAGGCATTTTGACATGGAAGATGAGCTTGTGAGTCACATTTCGAGGAGATCTATCGACATTCTCAAAACTAACTACAGGGATGAGTTATCCATGGAAGAGTGGAAGCTAGTTGTAAAACTGAAGAACATCTTCAAGATACAGTAG |
| Protein: MGRKKPSARGGDDEPTASSLVGGAKSKKKSVQIDDDEYSVGTELSEDPPKGEEDKVVITGKKKSKKGNKKGALQDDEEDDVVPEIAFEGKKKKSKSKKGGGSVSFALLDDDEGDKDDEDDKVEDEPVMSNKGKKGGNSFAASAFDALGGDDEDDEEAEKDEEEVSPITFSGKKKSSKSSKKSANSFAAALLDDDDDEEETNAVEEEESPEIMFTGKKKSSKKKGSSVLASLGDDDSMLGSEVAEEISKDKASDTKSAEVVEPAKSKKKKKNNKSGRTVQEEDDLDKLLAELGEGPASGKPASSQPEEDKVQAQAQPVAPVENAGEKEEEEESAAAKKRRKKKEKEKEKKAAAATSSVEAKEDKQEESVAEPLREKKDAKGKAAEKKLPKHVREMQEALARRQEAEERKKKEEEEKLRKEEEERLRQEELERQAEEAKRKKKEKEKEKLLRKKLEGKLLTAKQKSEALKREAFKNQLLANGGGLPLADEGEPATKRPVYANKKKSARQKGNDSTSVQVEEEVDPKENHADEPDTLXSAETEKVDLVESADTDEKSGTADVAAENGAEEDEEEDEWDAKSWGDDVDLKFKGDFDDEEDKAQPVVKKDMNDAVSKTQDSGPETVKPTAKPAGTENPTAPATKTLPGVEDAARGKRATRAKDASKKGKGLASSEPKEGEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESLNLLRMRDTEFIVALNKVDRLYGWKTCKNAPIVKAMKQQTKDVVNEFNMRLTGIITQFKEQGLNTELYYKNKEMGETFSIVPTSAITGEGIPDLLLLLVNWAQKTMVEKLTYVDDVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYVHHKEIKAAQGIKITAQGLEHAIAGTALHVIGPDDDIEAIKEQAMEDMESVLSRIDKSGEGVYVQASTLGSLEALLEFLKSPAVKIPVSGIGIGPVHKKDIMKAGVMLERKKEYATILAFDVKVTTDARELADEMGVKIFCADIIYHLFDQFKAYIESIKEEKKKESADEAVFPCVLRILPNCVFNKRDPIVLGVDVVEGILKIGTPICVPSREFIDIGRIASIENNHKPVDYAKKGSQVAIKIIASNPEEQKMFGRHFDMEDELVSHISRRSIDILKTNYRDELSMEEWKLVVKLKNIFKIQ |